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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01000791G0820 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 22183 Da PI: 9.3952 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.4 | 4.3e-19 | 6 | 54 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ++++GVr+++ +g+Wv+eIr+p +r++lg+f taeeAa+a+++a+ + PH01000791G0820 6 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 54 59*******9.**********8.....334*********************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 5.68E-32 | 6 | 66 | No hit | No description |
PROSITE profile | PS51032 | 21.878 | 7 | 64 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.9E-39 | 7 | 70 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 6.9E-12 | 7 | 51 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.7E-20 | 7 | 65 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 5.5E-33 | 7 | 65 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-10 | 8 | 19 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-10 | 30 | 46 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0010143 | Biological Process | cutin biosynthetic process | ||||
GO:0010166 | Biological Process | wax metabolic process | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MVQPKKKFRG VRQRHWGSWV SEIRHPLLKR RVWLGTFETA EEAARAYDEA AVLMSGRNAK 60 TNFPVQRSTT GDLAPAAGRD IRSNGGSSSS TSNLSQILSA KLRKCCKAPS PSLTCLRLDP 120 EKSHIGIWQK RAGARADSNW VMTVELNKEA ASCDAAAQST SAATASPATM DDEERIALQM 180 IEELLSRSSP ASPSHGEDEG SFVI* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 3e-16 | 6 | 66 | 4 | 65 | ATERF1 |
3gcc_A | 3e-16 | 6 | 66 | 4 | 65 | ATERF1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015627194.1 | 1e-130 | PREDICTED: ethylene-responsive transcription factor WIN1 | ||||
Swissprot | Q9XI33 | 1e-77 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A0E0JX06 | 1e-132 | A0A0E0JX06_ORYPU; Uncharacterized protein | ||||
STRING | BGIOSGA007748-PA | 1e-131 | (Oryza sativa Indica Group) | ||||
STRING | ORGLA02G0073000.1 | 1e-131 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3717 | 38 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 1e-60 | ERF family protein |